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SCIENTIFIC FRONTIER IV:
Neuroscience
The vast and intricate connectivity of the human brain combined
with the diversity of neurotransmitters are at the root of the
combinatorial power that contributes to the functional complexity
of the brain. On a molecular level the neurons communicate across
the 30 x 10 9 synapses in the human brain by means of neurotransmitters. This
synaptic communication is tightly regulated and accordingly alterations
in this communication lead to dysfunctions which range from developmental
abnormalities to aberrant behavior. Most of the proteins involved
in the communication are membrane proteins. The paucity of structural
and dynamic information on these proteins has contributed to a
lack of functional understanding.
In this arena NMR has much to offer. Functional NMR imaging can
serve as a bridge between molecular and physiological events in
the brain by mapping out tasks, thought patterns, memory, etc.
in exquisite anatomical detail. Moreover, diffusion sensitive
NMR imaging can characterize electrical current flow in biological
tissue. Recent advances in both solution and solid-state NMR demonstrate
the potential of these spectroscopic approaches for solving membrane
protein structure, one of the major challenges in structural biology
and neuroscience today.
A great many processes important to biological function are mediated
by molecules integrated in, or attached to, membrane surfaces.
Many of the molecules involved in these processes are membrane
proteins, but they also include lipids and various glycoconjugates
that adorn membrane surfaces with distinct collections of complex
carbohydrates. Structural and dynamic characterizations of these
macromolecules have been achieved infrequently due to the heterogeneous
nature of the samples. Bilayers form an inherently heterogeneous
environment with a hydrophobic interior and a hydrophilic exterior,
in addition the oligosaccharides decorating the membrane surfaces
are themselves heterogeneous. Such complexity makes crystallization
very difficult and NMR spectra complicated. But recently, the
first glycoprotein structures have been solved and much progress
has been made in developing the technology necessary to characterize
membrane protein structure and dynamics. The development of orientational
constraints is central to this latter technology. These structural
constraints define how individual sites are oriented with respect
to a global molecular axis. In addition, the development of liquid
crystalline media has been very important. Small aggregates of
lipid mixtures (bicelles) orient cooperatively in a magnetic field
to produce an alignment media for NMR spectroscopy. These preparations
are now being used in both solution NMR to gain residual dipolar
couplings for water soluble proteins as structural constraints
and in solid-state NMR where they take full advantage of the nuclear
spin interaction anisotropy. The discoveries of the utility of
orientational data and magnetic field oriented media are examples
of the types of discoveries that can be anticipated through research
at high magnetic fields.
The expectation that well in excess of 1000 new potential drugs
in the field of neuroscience will be derived from genomics and
that more than 90% of these will be targeted to channels and receptors,
exemplifies the importance of structure, dynamics, function correlations
for characterizing the drug binding pockets. Among the several
classes of important membrane associated proteins, ligand gated
channels, such as the acetylcholine and NMDA receptors are being
actively studied. Low resolution structural information on the
acetylcholine receptor is available from electron microscopy.
Recent solid-state NMR of lamellar phase lipid preparation and
solution NMR of micellar preparations of the 25 residue M2 peptide is leading to higher resolution structural insights.
This peptide is one of the membrane bound helices from the acetylcholine
receptor that displays electrophysiological properties similar
to that of the protein. By using a combination of solution and
solid-state NMR spectroscopy to study the same peptide in membrane
mimetic environments substantial progress has been made in showing
that their structure corresponds to -helices that are aligned in the lipid bilayer at an angle of
12° with respect to the bilayer normal. Most importantly, these
studies set the stage for investigations of larger segments, including
the entire membrane associated portion of these proteins, when
high field magnets become available. The goal is to be able to
determine the full three-dimensional structures of large membrane
proteins by NMR spectroscopy, and the success of this endeavor
will be strongly influenced by access to very high field magnets.
Studies of -amyloid, the putative cause of Alzheimer's disease represents
another example of a heterogeneous structure where solid-state
NMR has made a unique contribution. By using magic angle spinning
methods it is possible to work with unoriented samples. Through
distance measurements with homonuclear rotational resonance experiments,
the first structure of an aggregating protein, a 9-mer derived
from the C-terminal end of -amyloid was achieved. The peptide LMVGGVVIA, -34-42, forms fibrils very similar to those observed for the full
protein, -1-40 or -42. The low resolution NMR structure of the fibrils,
derived from a series of intramolecular and intermolecular distance
constraints, shows the 9-mers to be arranged as antiparallel -sheets. Refinements with additional distance and torsion angle
constraints using newly developed techniques to perform assignments,
measure heteronuclear ( 13 C- 15 N) and homonuclear ( 13 C- 13 C) distances, as well as torsion angles are proceeding. The field
of neuroscience illustrates the cross disciplinary nature of today's
forefront fields of science. Many disciplines impact on this field,
and major progress will be made only when the traditional boundaries
between disciplines fall. The NMR collaboratorium will be such
an environment where physiologists, molecular biologists, anatomists,
biophysicists, to name a few, can work together to understand
in a far more profound way the functioning and regulation of synapses.
In addition, mastery of a wide range of technologies is needed
to successfully carry out this work, not only solution and solid-state
NMR, but MR imaging, molecular biology, electrophysiology, peptide
synthesis, and optical spectroscopy play critical roles in this
field.
To meet the challenges of characterizing such protein structure
and dynamics not only will high magnetic fields be necessary,
but advances in NMR technology to gain sensitivity and resolution
are desperately needed. Developments in solution NMR at very high
field strengths leading to improved resolution for much larger
molecular weight species will bring the full potential of solution
NMR to a much greater array of proteins than previously possible.
Optically pumped He and Xe have great potential for enhancing
MR images. Dynamic nuclear polarization as described earlier has
demonstrated approximately 200 fold sensitivity enhancement in
frozen aqueous preparations. With such large signal enhancements
it should be possible to dramatically improve resolution in solid-state
spectra via higher dimensional experiments, reduced sample size
requirements, and/or dramatically shorten signal acquisition times.
Recent advances in probe and pulse sequence technology for solid-state
NMR at 800 MHz have led to substantially decreased linewidths
in magic angle spinning spectra. |