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Dr. Thomas H. Mareci
Professor, Biochemistry & Molecular Biology
UF, AMRIS Affiliated Faculty & Staff
| Email: |
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| Phone: | 352 - 392-3375 |
| Fax: | 352 - 392-3422 |
| Address: | LG-183 McKnight Brain Institute
UF
Gainesville, FL 32610-0245
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Disclaimer: The information presented below was automatically generated from a database. In the rare instance of an exact name match, it is possible that a citation is inaccurately attributed. The listing should therefore be considered unofficial. To report a mismatched publication, contact IMsystems@magnet.fsu.edu
2008 Publications & Scientific Activities
Peer-Reviewed Publications
- Chen, X.; Astary, G.W.; Sepulveda, H.; Mareci, T.H. and Sarntinoranont, M., Quantitative assessment of macromolecular concentration during direct infusion into an agarose hydrogel phantom using contrast-enhanced MRI, Magnet. Reson. Imaging, 26, 1433-1441 (2008)
- Shepherd, T.M.; Flint, J.J.; Thelwall, P.E.; Stanisz, G.J.; Mareci, T.H.; Yachnis, A.T. and Blackband, S.J., Postmortem interval alters the water relaxation and diffusion properties of rat nervous tissue - Implications for MRI studies of human autopsy samples, Neuroimage, 44 (3), 820-6 (2008)
2007 Publications & Scientific Activities
Peer-Reviewed Publications
- Chen, X.; Astary, G.W.; Mareci, T.H.; Sarntinoranont, M.; Stary, G.W.; Mareci, T.H. and Sarntinoranont, M., Determination of Macromolecular Concentration Following Direct Infusion into Hydrogel using Contrast-Enhanced MRI, Conf. Proc. IEEE Eng. Med. Biol. Soc., 1, 2887-90 (2007)
- Jian, B.; Vemuri, B.C.; Ozarslan, E.; Carney, P.R. and Mareci, T.H., A novel tensor distribution model for the diffusion-weighted MR signal, Neuroimage, 37 (1), 164-76 (2007)
- Kim, J.H.; Mareci, T.H. and Sarntinoranont, M., Voxelized model of interstitial transport in nervous tissue following direct infusion into white matter, Conf. Proc. IEEE Eng. Med. Biol. Soc., 1, 2114-7 (2007)
- Perrin, G.Q.; Li, H.; Fishbein, L.; Thomson, S.A.; Hwang, M.S.; Scarborough, M.T.; Yachnis, A.T.; Wallace, M.R.; Mareci, T.H. and Muir, D., An orthotopic xenograft model of intraneural NF1 MPNST suggests a potential association between steroid hormones and tumor cell proliferation, Lab Invest., 87 (11), 1092-102 (2007)
- Ramirez-Manzanares, A.; Rivera, M.; Vermuri, Baba C.; Carney, P. and Mareci, T., Duffusion basis functions decomposition for estimating white matter intravoxel fiber geometry, IEEE Trans. Medical Imaging, 26 (8), 1091-1102 (2007)
2006 Publications & Scientific Activities
Peer-Reviewed Publications
- McGraw, T.; Vemuri, B.; Yezierski, R. and Mareci, T., Segmentation of High Angular Resolution Diffusion MRI Modeled as a Field of von Mises-Fisher Mixtures, Lecture Notes in Computer Science, 3953, 463-475 (2006)
- Ozarslan, E.; Shepherd, T.M.; Vemuri, B.C.; Blackband, S.J. and Mareci, T.H., Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT), Neuroimage, 31 (3), 1086-1103 (2006)
- Sanchez, J.C.; Mareci, T.H.; Norman, W.M.; Principe, J.C.; Ditto W.L. and Carney, P.R., Evolving into Epilepsy: Multiscale Electrophysiolgical Analysis and Imaging in an Animal Model, Experimental Neurology, 198 (1), 31-47 (2006)
- Sarntinoranont, M.; Chen, X.; Zhao, J. and Mareci, T.H., Computational Model of Interstitial Transport in the Spinal Cord using Diffusion Tensor Imaging, Ann. Biomed. Eng., 34 (8), 1304-21 (2006)
- Shepherd, T.M.; Ozarslan, E.; King, M.A.; Mareci, T.H. and Blackband, S.J., Structural insights from high-resolution diffusion tensor imaging and tractography of the isolated rat hippocampus, Neuroimage, 32 (4), 1499-1509 (2006)
Books, Chapters, Reviews & Other One-Time Publications
- McGraw, T.; Vemuri, B.; Yezierski, R. and Mareci, T., "Segmentation of High Angular Resolution Diffusion MRI Modeled as a Field of von Mises-Fisher Mixtures", Lecture Notes in Computer Science, 3953, 463-475, 2006.
2005 Publications & Scientific Activities
Peer-Reviewed Publications
- Berens, S.; Colvin, D.; Yu, C-G.; Yezierski, R. and Mareci, T.H., Evaluation of the Pathological Characteristics of Excitotoxic Spinal Cord Injury with Magnetic Resonance Imaging, Am. J. Neuroradiol., 26, 1612-1622 (2005) [read online]
- Ozarslan, E.; Shepherd, T.M.; Vemuri, B.C.; Blackband, S.J. and Mareci, T.H., Fast Orientation Mapping from HARDI. Lecutre Notes in Computer Science, Lecture Notes in Computer Science, 3749, 156-163 (2005)
- Ozarslan, E.; Vemuri, B.C. and Mareci, T.H., Generalized Scalar Measures for Diffusion MRI Using Trace, Variance and Entropy, Magnet. Reson. Med., 53, 866-876 (2005) [read online]
Books, Chapters, Reviews & Other One-Time Publications
- Ozarslan, E.; Shepherd, T.M.; Vemuri, B.C.; Blackband, S.J. and Mareci, T.H., "Fast Orientation Mapping from HARDI", Lecture Notes in Computer Science, 3749, 156-163, 2005.
- Ozarslan, E.; Vemuri, B.C. and Mareci, T.H., "Higher rank tensors in diffusion MRI", Visualization and Image Processing of Tensor Fields, 2005.
2004 Publications & Scientific Activities
Peer-Reviewed Publications
- McGraw, T.; Vemuri, B.C.; Chen, Y.; Rao, M. and Mareci, T., DT-MRI denoising and neuronal fiber tracking, Medical Image Analysis, 8, 95-111 (2004)
- Velardo, M.J.; Burger, C.; Williams, P.R.; Baker, H.V.; Lopez, M.C.; Mareci, T.H.; White, T.E.; Muzyczka, N. and Reier, P.J., Patterns of gene expression reveal a temporally orchestrated wound healing response in the injured spinal cord., J. Neurosci., 24, 8562-8576 (2004)
- Wang, Z.; Vemuri, B.C.; Chen, Y.; Rao, M. and Mareci, T.H., A constrained variational principle for direct estimation and smoothing of the diffusion tensor field from complex diffusion weighted images, IEEE Trans. Medical Imaging, 23, 930-939 (2004)
Presentations, Posters & Abstracts
- Mareci, T., Diffusion Tensor Imaging of the Spinal Cord, Annual Symposium of the American Society of Spine Radiology, February 15-19 (2004)
- Mareci, T., MR Spectroscopy of the Spinal Cord, Annual Symposium of the American Society of Spine Radiology, February 15-19 (2004)
- Mareci, T.; Ozarslan, E. and Vemuri, B., Generalized Diffusion Tensor Imaging for Visualizing Highly Structured Materials, Int. Society for Magnetic Resonance, October 24-28 (2004)
- Ozarslan, E.; Vemuri, B.C. and Mareci, T.H., Fiber orientation mapping using generalized diffusion tensor imaging, Proc. of IEEE International Symposium on Biomedical Imaging, Arlington, VA, April 15-18 (2004)
- Ozarslan, E.; Vemuri, B.C. and Mareci, T.H., Generalized diffusion tensor imaging of excised rat brain, Proc. of the 12th Scientific Meeting of Inter. Soc. Magn. Reson. Med., Kyoto, Japan, May (2004)
- Ozarslan, E.; Vemuri, B.C. and Mareci, T.H., Higher rank tensors in diffusion MRI, Perspectives Workshop No. 04172: Visualization and Image Processing of Tensor Fields, Schloss Dagstuhl, Wadern, Germany, April 18 - 23 (2004)
- Ozarslan, E.; Vemuri, B.C. and Mareci, T.H., Multiple fiber orientations resolved by generalized diffusion tensor imaging, Proc. of the 12th Scientific Meeting of Inter. Soc. Magn. Reson. Med., Kyoto, Japan, May (2004)
- Shepherd, T.M.; Ozarslan, E.; King, M.A.; Mareci, T.H. and Blackband, S.J., Diffusion Tensor Imaging and Tractography of the Isolated Hippocampus, 12th Scientific Meeting of the Int. Society for Magnetic Resonance in Medicine, Tokyo, Japan, May (2004); Published in Proc. Intl. Soc. Mag. Reson. Med., 12, 725 (2004)
- Wang, Z.; Vemuri, B.C.; Ozarslan, E.; Chen, Y. and Mareci, T.H., Statistical analysis of a nonlinear estimator for ADC and its application to the optimization of diffusion weighting factor, Proc. of IEEE International Symposium on Biomedical Imaging, Arlington, VA, April 15-18 (2004)
Books, Chapters, Reviews & Other One-Time Publications
- Ozarslan, E. and Mareci, T.H., "Anatomical connectivity in the central nervous system revealed by diffusion tensor magnetic resonance imaging (DT-MRI)", Quantitative Neurosciences: Models, Algorithms, Diagnostics, and Therapeutic Applications, 147-171, 2004.
2003 Publications & Scientific Activities
Books, Chapters, Reviews & Other One-Time Publications
- Benveniste, H.; Mareci, T. and Blackband, S., "Anatomical Studies in the Rodent Brain and Spinal Cord: Applications of Magnetic Resonance Microscopy", Book: Techniques of Biomedical Imaging in Neuroscience. Editors: Nick van Bruggen. Tim Robert; Series: Methods and New Frontiers in Neuroscience. (Editor: Sidney Simon), 211-235, 2003.
- Wang, Z.; Vemuri, B.C.; Chen, Y. and Mareci, T., "A Constrained Variational Principle for Direct Estimation and Smoothing of the Diffusion Tensor Field from DWI", Lecture Notes in Computer Science, 2732, 660-671, 2003.
2002 Publications & Scientific Activities
Peer-Reviewed Publications
- Beck, B.L.; Plant, D.H.; Grant, S.C.; Thelwall, P.E.; Silver, X.S.; Mareci, T.H.; Benveniste, H.; Smith, M.; Collins, C.; Crozier S. and Blackband, S.J., Progress in High Field MRI at the University of Florida, MAGMA, 13, 152-157 (2002)
- Vemuri, B.C.; Chen, Y.; Wang, Z.; McGraw, T.; Mareci, T.; Reier, P. and Blackband, S.J., Fiber tractography from DTI and its validation, Proc. IEEE Int. Symposium on Biomedical Imaging, 0, 501-504 (2002)
Books, Chapters, Reviews & Other One-Time Publications
- McGraw, T.; Vemuri, B.C.; Wang, Z.; Chen, Y.; Rao, M. and Mareci, T., "Line Integral Convolution for Visualization of Fiber Tract Maps from DTI", Lecture Notes in Computer Science, 2489, 615-622, 2002.
2001 Publications & Scientific Activities
Peer-Reviewed Publications
- Inglis, B.A.; Bossart, E.L.; Buckley, D.L.; Wirth III, E.D. and Mareci, T.H., Visualization of Neural Tissue Water Compartments using Biexponential Diffusion Tenor MRI, Magnet. Reson. Med., 45, 580-587 (2001)
- Silver, X.S.; Ni-Wu, W.; Mercer, E.V.; Beck, B.L.; Bossart, E.L.; Inglis, B.A. and Mareci, T.H., In Vivo 1H Magnetic Resonance Imaging and Spectroscopy of the Rat Spinal Cord Using an Inductively Coupled Chronically Implanted RF Coil, Magnet. Reson. Med., 46, 1216-1222 (2001)
2000 Publications & Scientific Activities
Peer-Reviewed Publications
- Grant, S.; Aiken, N.; Plant, H.; Gibbs, S.; Mareci, T.; Webb, A. and Blackband, S., NMR Spectroscopy of Single Neurons, Magnet. Reson. Med., 44, 19-22 (2000)
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